getlevels: Levels frequency

Description Usage Arguments Value Author(s) References Examples

Description

Gives the calls status at every position

Usage

1
getlevels(.Object)

Arguments

.Object

an object of the CGHresults class

Value

levelslist

list of dataframes containing calls for each position

Author(s)

F. Picard, E. Lebarbier, M. Hoebeke, G. Rigaill, B. Thiam, S. Robin

References

Joint segmentation, calling and normalization of multiple CGH profiles, Biostatistics (2011)

Examples

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#set.seed(1)
#simul          = simulprofiles(M=5,n=100,k.mean=2,SNR=5,lambda=1)
#CGHd           = new("CGHdata",Y=simul$Y)
#CGHo           = new("CGHoptions")
#calling(CGHo)  = TRUE
#CGHr           = multiseg(CGHd,CGHo)
#levelslist     = getlevels(CGHr)

cghseg documentation built on May 31, 2017, 1:51 a.m.

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