Description Arguments Details Author(s) References See Also Examples
changes slot alpha
of a CGHoptions object
.Object |
an object of the CGHoptions class |
CGHo["alpha"]
sets the proportion of length of each profile that
will be used for . If ni is the length of profile i then
\code{uniKmax[[i]]} = α n_i
The speed of execution of the method decreases with Kmax.
Each Kmax must fulfill some conditions wrt CGHo
:
\code{uniKmax[[i]]} > \code{nblevels}
\code{uniKmax[[i]]}< n_i
F. Picard, E. Lebarbier, M. Hoebeke, G. Rigaill, B. Thiam, S. Robin
Joint segmentation, calling and normalization of multiple CGH profiles, Biostatistics (2011)
beta, getuniKmax
1 2 3 4 5 | set.seed(1)
simul = simulprofiles(M=5,n=100,k.mean=2,SNR=5,lambda=1)
CGHd = new("CGHdata",Y=simul$Y)
CGHo = new("CGHoptions")
alpha(CGHo) = 0.5
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.