acc_features: Accessors for ASpliFeatures object
In ASpli: Analysis of Alternative Splicing Using RNA-Seq

Description Usage Arguments Value Author(s) Examples

Accessors for ASpliFeatures object

  featuresg( x )
  featuresb( x )
  featuresj( x )
  transcriptExons( x )

`x`	An ASpliFeatures object

Returns a GenomicRanges object. Function featuresg returns a GRangesList object containing exon ranges for each gene. Functions featuresb and featuresj, returns GRanges object for all bins and junctions.

Estefania Mancini, Andres Rabinovich, Javier Iserte, Marcelo Yanovsky, Ariel Chernomoretz

  # Get data from an ASpliFeatures object
  
  features <- aspliFeaturesExample()
  
  fg <- featuresg( features )
  fb <- featuresb( features )
  fj <- featuresj( features )

  
  # Set data to an ASpliFeatures object
  
  featuresg( features ) <- fg 
  featuresb( features ) <- fb 
  featuresj( features ) <- fj