write: Write results

In ASpli: Analysis of Alternative Splicing Using RNA-Seq

Description

Export tab delimited files in structured output

Usage

  writeCounts(counts, output.dir="counts")
  writeRds(counts, output.dir="rds")
  writeDU(du, output.dir="du")
  writeAS(as, output.dir="as")
  writeJDU(jdu, output.dir="jdu")
  writeSplicingReport(sr, output.dir="sr")
  writeAll(counts, du, as, output.dir="output")

Arguments

counts	An ASpliCounts object
as	An ASpliAS object
du	An ASpliDU object
jdu	An ASpliJDU object
sr	An ASpliSplicingReport object
output.dir	Name of output folder (new or existing)

Value

Tab delimited files are exported in a tidy manner into output folder

Author(s)

Estefania Mancini, Andres Rabinovich, Javier Iserte, Marcelo Yanovsky, Ariel Chernomoretz

See Also

jCounts, binGenome, DUreport.norm, DUreport.offset

ASpli documentation built on Nov. 8, 2020, 5:21 p.m.