example_data: Example Aspli objects

In ASpli: Analysis of Alternative Splicing Using RNA-Seq

Description

ASpli includes functions to easily build ASpli objects, used in examples in the vignette and man pages.

Usage

  aspliASexample()
  aspliBamsExample()
  aspliCountsExample()
  aspliDUexample1()
  aspliDUexample2()
  aspliExampleBamList()
  aspliExampleGTF()
  aspliFeaturesExample()
  aspliJunctionDUexample()
  aspliTargetsExample()

Value

An ASpli object with example data.

Author(s)

Estefania Mancini, Andres Rabinovich, Javier Iserte, Marcelo Yanovsky, Ariel Chernomoretz

Examples

  #as <- aspliASexample()
  #bams <- aspliBamsExample()
  #counts <- aspliCountsExample()
  #du1 <- aspliDUexample1()
  #du2 <- aspliDUexample2()
  #bamfiles <- aspliExampleBamList()
  #gtffile <- aspliExampleGTF()
  #features <- aspliFeaturesExample()
  #jdu <- aspliJunctionDUexample()
  #targets <-aspliTargetsExample()

ASpli documentation built on Nov. 8, 2020, 5:21 p.m.