inSilicoCellModel: Simulates Cell Model

In CancerInSilico: An R interface for computational modeling of tumor progression

Description

Simulates Cell Model

Usage

inSilicoCellModel(initialNum, runTime, density,
  modelType = "DrasdoHohme", ...)

Arguments

initialNum	how many cells initially
runTime	how long the simulation runs in real cellular time (hours)
density	initial density of cell population
modelType	the name of the cell-based model to use
...	model specific parameters (depends on modelType)

Details

This function provides a centralized R interface to run c++ code for cell-based models implemented in this package. Standard parameters, as well as model-specific parameters, are passed in to this function along with a model name. This function then runs the model and returns a CellModel object containing all of the information from the model. This object can then be accessed with various functions designed to interact with the class. To see a list of available functions, there is a show() command implemented for CellModel objects.

Value

A CellModel containing all info from the model run

Examples

inSilicoCellModel(initialNum=1, runTime=8, density=0.1)

CancerInSilico documentation built on Nov. 8, 2020, 6:32 p.m.