initialize-CellModel-method: Constructor for CellModel

Description Usage Arguments Value

Description

Constructor for CellModel

Usage

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## S4 method for signature 'CellModel'
initialize(.Object, initialNum, runTime, density,
  boundary = 1, syncCycles = FALSE, randSeed = 0,
  outputIncrement = 4, recordIncrement = 0.1, timeIncrement = 0.001,
  cellTypes = c(new("CellType", name = "DEFAULT")),
  cellTypeInitFreq = c(1), drugs = list(), ...)

Arguments

.Object

CellModel object

initialNum

initial number of cells

runTime

run time of the model in hours

density

initial density of the cell population

boundary

impose a physical boundary on the cells

syncCycles

synchronization all cells to the same point in the cycle

randSeed

random seed

outputIncrement

how often (model hours) to print simulation status

recordIncrement

how oftern (model hours) to record cell information

timeIncrement

internal time step (model hours) used by the model

cellTypes

list of CellType objects

cellTypeInitFreq

initial proportions of all cell types

drugs

list of Drug objects

...

model specific parameters

Value

initialized cell model object


CancerInSilico documentation built on Nov. 8, 2020, 6:32 p.m.