Description Usage Arguments Details Value Author(s) See Also Examples

This function cuts a model according to a bitstring optimised at T1, and simulates the model accordingly.

1 | ```
simulateTN(CNOlist, model, bStrings)
``` |

`CNOlist` |
a CNOlist object |

`model` |
a full model |

`bStrings` |
a bitstring to cut the model, as output by |

This function is a wrapper around the family of functions called simulatorT1 , T2 and TN.

a matrix of simulated values, including all species in the model, i.e. to be used as input of gaBinaryTN.

T.Cokelaer, S.Schrier based on simulatorT1 (C.Terfve)

cutAndPlotResultsT1, simulatorT1

1 2 3 4 5 6 7 8 9 10 | ```
# This will compute the output of a random model obtained by randomly selecting
# which gates of the initial models are included.
data(CNOlistToy,package="CellNOptR")
data(ToyModel,package="CellNOptR")
simRes<-simulateTN(
CNOlist=CNOlistToy,
model=ToyModel,
bStrings=list(round(runif(length(ToyModel$reacID)))))
``` |

CellNOptR documentation built on Nov. 17, 2017, 9:08 a.m.

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