To improve the stability of the clustering and to remove from the analysis isolated cells that do not belong to any subgroup, cells displaying a Pearson’s pairwise correlation score below a threshold t with at least p % of cells are filtered (p is set at 1 % by default). The correlation threshold t is calculated as a percentile of Pearson’s pairwise correlation scores for a randomized dataset (percentile is recommended to be set as the 99th percentile). The correlation threshold is represented by the red line on the distribution plot.
Any scripts or data that you put into this service are public.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.