load_MSIGdb: Load and format MSIGdb pathways using msigdbr package
In ChromSCape: Analysis of single-cell epigenomics datasets with a Shiny App
Description
Usage
Arguments
Value
View source: R/diff_analysis_gene_set_enrichment.R
Description
Load and format MSIGdb pathways using msigdbr package
Usage
1
load_MSIGdb(ref, GeneSetClasses)
Arguments
ref
Reference genome, either mm10 or hg38
GeneSetClasses
Which classes of MSIGdb to load
Value
A list containing the GeneSet (list), GeneSetDf (data.frame) and
GenePool character vector of all possible genes
ChromSCape documentation built on Nov. 8, 2020, 6:57 p.m.
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Description Usage Arguments Value
View source: R/diff_analysis_gene_set_enrichment.R
Description
Load and format MSIGdb pathways using msigdbr package
Usage
1 | load_MSIGdb(ref, GeneSetClasses)
|
Arguments
ref |
Reference genome, either mm10 or hg38 |
GeneSetClasses |
Which classes of MSIGdb to load |
Value
A list containing the GeneSet (list), GeneSetDf (data.frame) and GenePool character vector of all possible genes
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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