preprocess_TPM: Preprocess scExp - Transcripts per Million (TPM)
In ChromSCape: Analysis of single-cell epigenomics datasets with a Shiny App
Description
Usage
Arguments
Value
Examples
View source: R/preprocessing_filtering_reduction.R
Description
Preprocess scExp - Transcripts per Million (TPM)
Usage
1
Arguments
scExp
A SingleCellExperiment Object
Value
A SingleCellExperiment object.
Examples
1
2
3
scExp = create_scExp(create_scDataset_raw()$mat,create_scDataset_raw()$annot)
scExp = preprocess_TPM(scExp)
head(SingleCellExperiment::normcounts(scExp))
ChromSCape documentation built on Nov. 8, 2020, 6:57 p.m.
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Description Usage Arguments Value Examples
View source: R/preprocessing_filtering_reduction.R
Description
Preprocess scExp - Transcripts per Million (TPM)
Usage
1 |
Arguments
scExp |
A SingleCellExperiment Object |
Value
A SingleCellExperiment object.
Examples
1 2 3 | scExp = create_scExp(create_scDataset_raw()$mat,create_scDataset_raw()$annot)
scExp = preprocess_TPM(scExp)
head(SingleCellExperiment::normcounts(scExp))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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