DMRsNoiseFilterCG: The DMRs between WT and met1-3 in CG context

Description Format See Also

Description

A GRangesList object containing the DMRs between Wild Type (WT) and met1-3 mutant (met1-3) in Arabidopsis thaliana (see methylationDataList). The DMRs were computed on the first 1 Mbp from Chromosome 3 with noise filter method using a triangular kernel and a windowSize of 100 bp

Format

The GRanges element contain 11 metadata columns; see computeDMRs

See Also

filterDMRs, computeDMRs, analyseReadsInsideRegionsForCondition and mergeDMRsIteratively


DMRcaller documentation built on Nov. 17, 2017, 9:37 a.m.