PlotPattern: Visualize the patterns
In EBSeq: An R package for gene and isoform differential expression analysis of RNA-seq data
Description
Usage
Arguments
Value
Author(s)
References
Examples
Description
'PlotPattern' generates the visualized patterns before the multiple condition test.
Usage
1
PlotPattern(Patterns)
Arguments
Patterns
The output of GetPatterns function.
Value
A heatmap to visualize the patterns of interest.
Author(s)
Ning Leng
References
Ning Leng, John A. Dawson, James A. Thomson, Victor Ruotti, Anna I. Rissman, Bart M.G. Smits, Jill D. Haag, Michael N. Gould, Ron M. Stewart, and Christina Kendziorski. EBSeq: An empirical Bayes hierarchical model for inference in RNA-seq experiments. Bioinformatics (2013)
Examples
1
2
3
Conditions = c("C1","C1","C2","C2","C3","C3")
Patterns = GetPatterns(Conditions)
PlotPattern(Patterns)
EBSeq documentation built on Nov. 8, 2020, 6:52 p.m.
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Description Usage Arguments Value Author(s) References Examples
Description
'PlotPattern' generates the visualized patterns before the multiple condition test.
Usage
1 | PlotPattern(Patterns)
|
Arguments
Patterns |
The output of GetPatterns function. |
Value
A heatmap to visualize the patterns of interest.
Author(s)
Ning Leng
References
Ning Leng, John A. Dawson, James A. Thomson, Victor Ruotti, Anna I. Rissman, Bart M.G. Smits, Jill D. Haag, Michael N. Gould, Ron M. Stewart, and Christina Kendziorski. EBSeq: An empirical Bayes hierarchical model for inference in RNA-seq experiments. Bioinformatics (2013)
Examples
1 2 3 | Conditions = c("C1","C1","C2","C2","C3","C3")
Patterns = GetPatterns(Conditions)
PlotPattern(Patterns)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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