summarizeTF: Make MR TF binary table

In ELMER: Inferring Regulatory Element Landscapes and Transcription Factor Networks Using Cancer Methylomes

Description

This function uses ELMER analysis results and summarizes the MR TF identified in each analysis

Usage

summarizeTF(files = NULL, path = NULL, classification = "family", top = FALSE)

Arguments

files	Output of get.pairs function: dataframe or file path
path	Directory path with the ELMER results. Files with the following pattern will be selected TF.*with.motif.summary.csv.
classification	Consider subfamily or family classifications
top	Get only the top potential (default) or all potentials

ELMER documentation built on Nov. 8, 2020, 4:59 p.m.