nOrganisms: Get the number of organisms represented in a pangenome

In FindMyFriends: Microbial Comparative Genomics in R

Description

This method returns the current number of organisms in a pgVirtual subclass. This is also the result of calling length() on the object.

Usage

nOrganisms(object)

## S4 method for signature 'pgVirtual'
nOrganisms(object)

Arguments

object

A pgVirtual subclass

Value

An integer giving the number of organisms

Methods (by class)

• pgVirtual: The number of organisms in the pangenome for pgVirtual subclasses.

Examples

testPG <- .loadPgExample()
nOrganisms(testPG)

FindMyFriends documentation built on Nov. 8, 2020, 6:46 p.m.