pgInMemLoc-class: Superclass for gene location aware pangenome

Description Slots See Also

Description

This virtual class is the superclass for all standard, location aware, pangenome classes in FindMyFriends. It stores all chromosomal information in a data.frame.

Slots

geneLocation

A data.frame containing the columns 'contig', 'start', 'end' and 'strand' and a row for each gene in the pangenome.

See Also

Other Pangenome_classes: pgFull-class, pgFullLoc-class, pgInMem-class, pgLM-class, pgLMLoc-class, pgSlim-class, pgSlimLoc-class, pgVirtual-class, pgVirtualLoc-class


FindMyFriends documentation built on May 31, 2017, 3:49 p.m.

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