pgInMemLoc-class: Superclass for gene location aware pangenome
In FindMyFriends: Microbial Comparative Genomics in R
Description
This virtual class is the superclass for all standard, location aware,
pangenome classes in FindMyFriends. It stores all chromosomal information in
a data.frame.
Slots
geneLocationA data.frame containing the columns 'contig', 'start',
'end' and 'strand' and a row for each gene in the pangenome.
See Also
Other Pangenome_classes: pgFull-class,
pgFullLoc-class,
pgInMem-class, pgLM-class,
pgLMLoc-class, pgSlim-class,
pgSlimLoc-class,
pgVirtual-class,
pgVirtualLoc-class
FindMyFriends documentation built on Nov. 8, 2020, 6:46 p.m.
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Description
This virtual class is the superclass for all standard, location aware, pangenome classes in FindMyFriends. It stores all chromosomal information in a data.frame.
Slots
geneLocationA data.frame containing the columns 'contig', 'start', 'end' and 'strand' and a row for each gene in the pangenome.
See Also
Other Pangenome_classes: pgFull-class,
pgFullLoc-class,
pgInMem-class, pgLM-class,
pgLMLoc-class, pgSlim-class,
pgSlimLoc-class,
pgVirtual-class,
pgVirtualLoc-class
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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