topPATH: Present top KEGG enrichment test information

In GeneAnswers: Integrated Interpretation of Genes

Description

Function to present top KEGG enichmentInfo of given GeneAnswers instance.

Usage

topPATH(x, catTerm = TRUE, keepID = TRUE, ...)

Arguments

x	a given GeneAnswers instance containing KEGG information
catTerm	logic value to determine whether mapping to DOLite terms or not
keepID	logic value to determine whether showing IDs or not
...	other parameters to transfer to topCategory

Value

print necessary information on the screen and save into a specified file if request.

Author(s)

Gang Feng, Pan Du and Simon Lin

References

Feng, G., Du, P., Krett, N., Tessel, M., Rosen, S., Kibbe, W.A. and Lin, S.M., 'A collection of bioconductor methods to visualize gene-list annotations', BMC Research Notes 2010, 3:10

See Also

topCategory

Examples

# x is a GeneAnswers instance with DOLite test
## Not run: topPATH(x, top=10)

GeneAnswers documentation built on Nov. 8, 2020, 4:53 p.m.