validDiggitInteractions: Return a set of events 'covered' by specified cMR-event...
In MOMA: Multi Omic Master Regulator Analysis
Description
Usage
Arguments
Value
View source: R/genomic.saturation.r
Description
Return a set of events 'covered' by specified cMR-event interactions
Usage
1
validDiggitInteractions(interactions, gene.loc.mapping, selected.tfs)
Arguments
interactions
List indexed by amp/mut/del/fus from cMRs to interacting
events
gene.loc.mapping
Data.frame mapping entrezIDs to cytoband locations
selected.tfs
For each event type list, search within only these cMRS
Value
a list of events 'covered' by the supplied interactions of
type mut/amp/del/fus
MOMA documentation built on Nov. 8, 2020, 6:01 p.m.
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Description Usage Arguments Value
View source: R/genomic.saturation.r
Description
Return a set of events 'covered' by specified cMR-event interactions
Usage
1 | validDiggitInteractions(interactions, gene.loc.mapping, selected.tfs)
|
Arguments
interactions |
List indexed by amp/mut/del/fus from cMRs to interacting events |
gene.loc.mapping |
Data.frame mapping entrezIDs to cytoband locations |
selected.tfs |
For each event type list, search within only these cMRS |
Value
a list of events 'covered' by the supplied interactions of type mut/amp/del/fus
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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