validDiggitInteractions: Return a set of events 'covered' by specified cMR-event...

Description Usage Arguments Value

View source: R/genomic.saturation.r

Description

Return a set of events 'covered' by specified cMR-event interactions

Usage

1
validDiggitInteractions(interactions, gene.loc.mapping, selected.tfs)

Arguments

interactions

List indexed by amp/mut/del/fus from cMRs to interacting events

gene.loc.mapping

Data.frame mapping entrezIDs to cytoband locations

selected.tfs

For each event type list, search within only these cMRS

Value

a list of events 'covered' by the supplied interactions of type mut/amp/del/fus


MOMA documentation built on Nov. 8, 2020, 6:01 p.m.