getTree: Get the Tree Object
In OmaDB: R wrapper for the OMA REST API
Description
Usage
Arguments
Value
Examples
Description
A convenience function to obtain a tree object from newick tree,
essentially wraps read.tree from the ape package.
Usage
1
getTree(newick)
Arguments
newick
The newick tree to be instantiated.
Value
a tree object
Examples
1
2
taxonomy = getTaxonomy(root='Alveolata')
getTree(newick=taxonomy$newick)
OmaDB documentation built on Nov. 13, 2020, 2 a.m.
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Description Usage Arguments Value Examples
Description
A convenience function to obtain a tree object from newick tree, essentially wraps read.tree from the ape package.
Usage
1 | getTree(newick)
|
Arguments
newick |
The newick tree to be instantiated. |
Value
a tree object
Examples
1 2 | taxonomy = getTaxonomy(root='Alveolata')
getTree(newick=taxonomy$newick)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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