orthologs: An example orthologs object.

Description Usage Format Source

Description

A dataframe containing information for the orthologs of protein YEAST00058.

Usage

1

Format

A dataframe object with 15 variables:

entry_nr

entry number of the ortholog

omaid

oma identifier of the ortholog

canonicalid

canonicalid of the ortholog

sequence_md5

sequence_md5 of the ortholog

oma_group

oma_group of the ortholog

oma_hog_id

hog id of the ortholog

chromosome

chromosomal location of the ortholog

locus.start

start locus of the ortholog

locus.end

end locus of the ortholog

locus.strand

locus strand of the ortholog

is_main_isoform

true/false

rel_type

relationship type of the ortholog to the gene

distance

ortholog distance

score

ortholog score

...

Source

https://omabrowser.org/api/protein/YEAST00058/orthologs


OmaDB documentation built on Nov. 13, 2020, 2 a.m.