log2CPM: Compute log2(counts per mil reads) and library size for each...

Description Usage Arguments Value Examples

View source: R/utils.R

Description

Compute log2(counts per mil reads) and library size for each sample

Usage

1
log2CPM(qcounts, lib.size = NULL)

Arguments

qcounts

quantile normalized counts

lib.size

default is colsums(qcounts)

Value

list containing log2(quantile counts per mil reads) and library sizes

Examples

1
log2CPM(matrix(1:12, nrow = 3))

PathoStat documentation built on Nov. 9, 2018, 6 p.m.