getSelectedFastaOma: Get selected fasta sequences from a raw OMA dataframe
In PhyloProfile: PhyloProfile
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
View source: R/getOmaBrowser.R
Description
Get selected fasta sequences from a raw OMA dataframe
Usage
1
getSelectedFastaOma(finalOmaDf = NULL, seqID = NULL)
Arguments
finalOmaDf
raw OMA data for a list of proteins (see ?getDataForOneOma)
seqID
OMA ID of selected protein
Value
Required protein sequence in fasta format.
Author(s)
Vinh Tran tran@bio.uni-frankfurt.de
See Also
Examples
1
2
3
print("Uncomment the following line to run the function")
# omaData <- getDataForOneOma("HUMAN29397", "OG")
# getSelectedFastaOma(omaData, "HUMAN29397")
PhyloProfile documentation built on March 27, 2021, 6:01 p.m.
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Description Usage Arguments Value Author(s) See Also Examples
View source: R/getOmaBrowser.R
Description
Get selected fasta sequences from a raw OMA dataframe
Usage
1 | getSelectedFastaOma(finalOmaDf = NULL, seqID = NULL)
|
Arguments
finalOmaDf |
raw OMA data for a list of proteins (see ?getDataForOneOma) |
seqID |
OMA ID of selected protein |
Value
Required protein sequence in fasta format.
Author(s)
Vinh Tran tran@bio.uni-frankfurt.de
See Also
Examples
1 2 3 | print("Uncomment the following line to run the function")
# omaData <- getDataForOneOma("HUMAN29397", "OG")
# getSelectedFastaOma(omaData, "HUMAN29397")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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