rankIndexing: Indexing all available ranks (including norank)

Description Usage Arguments Value Author(s) Examples

Description

Indexing all available ranks (including norank)

Usage

1
rankIndexing(rankListFile = NULL)

Arguments

rankListFile

Input file, where each row is a rank list of a taxon (see rankListFile in example)

Value

A dataframe containing a list of all possible ranks and their indexed values.

Author(s)

Vinh Tran tran@bio.uni-frankfurt.de

Examples

1
2
3
4
5
6
7
## Not run: 
rankListFile <- system.file(
    "extdata", "data/rankList.txt", package = "PhyloProfile", mustWork = TRUE
)
rankIndexing(rankListFile)

## End(Not run)

PhyloProfile documentation built on March 27, 2021, 6:01 p.m.