makeSimpleGraph: Make Simple Graph

In RCy3: Functions to Access and Control Cytoscape

Description

This function creates a simple graphNEL object with various node and edge attribute types to help demonstrate round trip conversion with Cytoscape networks via RCy3.

Usage

makeSimpleGraph()

Value

A graphNEL object with a few nodes, edges and attributes

See Also

createNetworkFromGraph, createGraphFromNetwork, makeSimpleIgraph

Examples

{
makeSimpleGraph()
}

Example output

Loading required package: graph
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, cbind, colMeans, colSums, colnames, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, lengths, mapply, match, mget, order, paste, pmax, pmax.int,
    pmin, pmin.int, rank, rbind, rowMeans, rowSums, rownames, sapply,
    setdiff, sort, table, tapply, union, unique, unsplit, which,
    which.max, which.min

A graphNEL graph with directed edges
Number of Nodes = 3 
Number of Edges = 3 

RCy3 documentation built on Nov. 21, 2020, 2 a.m.