get_IDs: Extract information from TCGA barcodes.
In TCGAbiolinks: TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC data
Description
Usage
Arguments
Value
Description
get_IDs allows user to extract metadata from barcodes. The dataframe returned has columns for
'project', 'tss','participant', 'sample', "portion", "plate", and "center"
Usage
1
Arguments
data
numeric matrix, each row represents a gene, each column represents a sample
Value
data frame with columns 'project', 'tss','participant', 'sample', "portion", "plate", "center", "condition"
TCGAbiolinks documentation built on Nov. 8, 2020, 5:37 p.m.
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Description Usage Arguments Value
Description
get_IDs allows user to extract metadata from barcodes. The dataframe returned has columns for 'project', 'tss','participant', 'sample', "portion", "plate", and "center"
Usage
1 |
Arguments
data |
numeric matrix, each row represents a gene, each column represents a sample |
Value
data frame with columns 'project', 'tss','participant', 'sample', "portion", "plate", "center", "condition"
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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