getSampleFilesSummary: Retrieve summary of files per sample in a project

Description Usage Arguments Value Examples

View source: R/api.R

Description

Retrieve the numner of files under each data_category + data_type + experimental_strategy + platform Almost like https://portal.gdc.cancer.gov/exploration

Usage

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getSampleFilesSummary(project, legacy = FALSE, files.access = NA)

Arguments

project

A GDC project

legacy

Access legacy database ? Deafult: FALSE

files.access

Filter by file access ("open" or "controlled"). Default: no filter

Value

A data frame with the maf file information

Examples

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   summary <- getSampleFilesSummary("TCGA-UCS")
## Not run: 
   summary <- getSampleFilesSummary(c("TCGA-OV","TCGA-ACC"))

## End(Not run)

TCGAbiolinks documentation built on Nov. 8, 2020, 5:37 p.m.