basis-set-scNMFSet-method: Modify basis matrices

Description Usage Arguments Value Examples

Description

Access and modify basis matrices

Usage

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## S4 replacement method for signature 'scNMFSet'
basis(object) <- value

Arguments

object

Object of class scNMFSet

value

Basis matrix to be substituted

Value

Input object with updated basis matrices

Examples

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set.seed(1)
s <- scNMFSet(count=matrix(rpois(n=12,lambda=3),4,3))
s <- vb_factorize(s, ranks=3)
basis(s)[[1]] <- apply(basis(s)[[1]],c(1,2),round,digits=3)
basis(s)

ccfindR documentation built on Nov. 8, 2020, 5:12 p.m.