coeff-set-scNMFSet-method: Modify coefficient matrices

In ccfindR: Cancer Clone Finder

Description

Can be used to access and modify coefficient matrices

Usage

## S4 replacement method for signature 'scNMFSet'
coeff(object) <- value

Arguments

object	Object of class scNMFSet
value	Coefficient matrix to be substituted

Value

Input object with updated coefficient matrices

Examples

s <- scNMFSet(count=matrix(rpois(n=12,lambda=3),4,3))
s <- vb_factorize(s, ranks=3)
coeff(s)[[1]] <- apply(coeff(s)[[1]],c(1,2),round,digits=2)
coeff(s)

ccfindR documentation built on Nov. 8, 2020, 5:12 p.m.