write_meta: Write meta genes to a file
In ccfindR: Cancer Clone Finder
Description
Usage
Arguments
Value
Examples
Description
Write a csv file of meta gene lists from input list
Usage
1
write_meta(meta, file)
Arguments
meta
List of meta genes output from meta_genes
file
Output file name
Value
NULL
Examples
1
2
3
4
5
6
7
set.seed(1)
x <- simulate_whx(nrow=50, ncol=100, rank=5)
s <- scNMFSet(x$x)
s <- vb_factorize(s, ranks=seq(2,8), nrun=5)
plot(s)
m <- meta_genes(s, rank=5)
write_meta(m, file='meta.csv')
ccfindR documentation built on Nov. 8, 2020, 5:12 p.m.
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Description Usage Arguments Value Examples
Description
Write a csv file of meta gene lists from input list
Usage
1 | write_meta(meta, file)
|
Arguments
meta |
List of meta genes output from |
file |
Output file name |
Value
NULL
Examples
1 2 3 4 5 6 7 | set.seed(1)
x <- simulate_whx(nrow=50, ncol=100, rank=5)
s <- scNMFSet(x$x)
s <- vb_factorize(s, ranks=seq(2,8), nrun=5)
plot(s)
m <- meta_genes(s, rank=5)
write_meta(m, file='meta.csv')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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