clustifyr-package: clustifyr: Classifier for Single-cell RNA-seq Using Cell...

In clustifyr: Classifier for Single-cell RNA-seq Using Cell Clusters

Description

Package designed to aid in classifying cells from single-cell RNA sequencing data using external reference data (e.g., bulk RNA-seq, scRNA-seq, microarray, gene lists). A variety of correlation based methods and gene list enrichment methods are provided to assist cell type assignment.

Author(s)

Maintainer: Rui Fu [e-mail]

Authors:

• Kent Riemondy [e-mail]

Other contributors:

• Austin Gillen [e-mail] [contributor]

• Chengzhe Tian [e-mail] [contributor]

• Jay Hesselberth [e-mail] [contributor]

• Yue Hao [e-mail] [contributor]

• Michelle Daya [e-mail] [contributor]

• Sidhant Puntambekar [e-mail] [contributor]

See Also

Useful links:

• http://github.com/rnabioco/clustifyr#readme

• https://rnabioco.github.io/clustifyr/

• Report bugs at https://github.com/rnabioco/clustifyr/issues

clustifyr documentation built on Nov. 8, 2020, 5:32 p.m.