overcluster: Overcluster by kmeans per cluster
In clustifyr: Classifier for Single-cell RNA-seq Using Cell Clusters
Description
Usage
Arguments
Value
Examples
Description
Overcluster by kmeans per cluster
Usage
1
overcluster(mat, cluster_id, power = 0.15)
Arguments
mat
expression matrix
cluster_id
list of ids per cluster
power
decides the number of clusters for kmeans
Value
new cluster_id list of more clusters
Examples
1
2
3
4
5
res <- overcluster(
mat = pbmc_matrix_small,
cluster_id = split(colnames(pbmc_matrix_small), pbmc_meta$classified)
)
length(res)
clustifyr documentation built on Nov. 8, 2020, 5:32 p.m.
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Description Usage Arguments Value Examples
Description
Overcluster by kmeans per cluster
Usage
1 | overcluster(mat, cluster_id, power = 0.15)
|
Arguments
mat |
expression matrix |
cluster_id |
list of ids per cluster |
power |
decides the number of clusters for kmeans |
Value
new cluster_id list of more clusters
Examples
1 2 3 4 5 | res <- overcluster(
mat = pbmc_matrix_small,
cluster_id = split(colnames(pbmc_matrix_small), pbmc_meta$classified)
)
length(res)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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