call_consensus: get concensus calls for a list of cor calls
In clustifyr: Classifier for Single-cell RNA-seq Using Cell Clusters
Description
Usage
Arguments
Value
Examples
Description
get concensus calls for a list of cor calls
Usage
1
call_consensus(list_of_res)
Arguments
list_of_res
list of call dataframes from cor_to_call_rank
Value
dataframe of cluster, new ident, and mean rank
Examples
1
2
3
4
5
6
7
8
9
10
res <- clustify(
input = pbmc_matrix_small,
metadata = pbmc_meta,
cluster_col = "classified",
ref_mat = cbmc_ref
)
res2 <- cor_to_call_rank(res, threshold = "auto")
res3 <- cor_to_call_rank(res)
call_consensus(list(res2, res3))
clustifyr documentation built on Nov. 8, 2020, 5:32 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
get concensus calls for a list of cor calls
Usage
1 | call_consensus(list_of_res)
|
Arguments
list_of_res |
list of call dataframes from cor_to_call_rank |
Value
dataframe of cluster, new ident, and mean rank
Examples
1 2 3 4 5 6 7 8 9 10 | res <- clustify(
input = pbmc_matrix_small,
metadata = pbmc_meta,
cluster_col = "classified",
ref_mat = cbmc_ref
)
res2 <- cor_to_call_rank(res, threshold = "auto")
res3 <- cor_to_call_rank(res)
call_consensus(list(res2, res3))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.