Files in cpvSNP
Gene set analysis methods for SNP association p-values that lie in genes in given gene sets
NEWS
NAMESPACE
DESCRIPTION
build/vignette.rds
data/test_genesHg19.RData
data/datalist
data/geneSetAnalysis.RData
data/test_snpsGSC.RData
R/VEGASResult-accessors.R
R/show-methods.R
R/geneToSNPList.R
R/glossi.R
R/vegasPrep.R
R/AllGenerics.R
R/plotPvals.R
R/simulate_chisq.R
R/glossiMarginal.R
R/createArrayData.R
R/GeneSetResult-accessors.R
R/vegas.R
R/GLOSSIResult-accessors.R
R/assocPvalBySetPlot.R
R/vegasMarginal.R
R/AllClasses.R
vignettes/cpvSNP.Rnw
man/show-methods.Rd
man/GeneSetResultCollection-class.Rd
man/simulatedStats-method.Rd
man/createArrayData.Rd
man/vegas.Rd
man/geneSets.Rd
man/GLOSSIResultCollection-class.Rd
man/geneToSNPList.Rd
man/GeneSetResult-class.Rd
man/degreesOfFreedom-method.Rd
man/geneSetName-methods.Rd
man/VEGASResultCollection-class.Rd
man/geneSetAnalysis.Rd
man/exampleArrayData.Rd
man/assocPvalBySetPlot.Rd
man/glossiMarginal.Rd
man/simulate_chisq.Rd
man/VEGASResult-class.Rd
man/pValue-method.Rd
man/glossi.Rd
man/vegasMarginal.Rd
man/GLOSSIResult-class.Rd
man/statistic-methods.Rd
man/plotPvals.Rd
tests/runTests.R
inst/doc/cpvSNP.R
inst/doc/cpvSNP.pdf
inst/doc/cpvSNP.Rnw
inst/unitTests/test_cpvSNP.R
