plotPvals: Create a Plot of P-Values Against Number of SNPs per Set for...

In cpvSNP: Gene set analysis methods for SNP association p-values that lie in genes in given gene sets

Description

Plots association test p-values against number of SNPs per gene set.

Usage

plotPvals(set, title = "", xlab = "SNPs per Gene Set", ylab = "PValue",
  ...)

Arguments

set	An object of class GeneSetResultCollection.
title	A character string containing the title of the plot. Default is "", a blank title.
xlab	A character vector with the label for the x-axis on the plot. Default is SNPs per Gene Set.
ylab	A character vector holding the label for the y-axis on the plot. Default is PValue.
...	Further arguments to be passed to the plotting methods, such as graphical parameters.

Details

Creates a plot of all p-values against the number of SNPs in the gene set, for all sets within a collection.

Value

Creates a plot.

Author(s)

Caitlin McHugh [e-mail]

cpvSNP documentation built on Nov. 8, 2020, 6 p.m.