Candidate Differentially Expressed Regions (DERs) for the example data. For more information check calculatePvalues.

A list with four components.

- regions
a GRanges object with the candidate DERs.

- nullStats
a numeric Rle with the mean F-statistics for the null DERs found from the permutations.

- nullWidths
an integer Rle with the width of each null candidate DER.

- nullPermutation
an integer Rle with the permutation number for each candidate DER. It identifies which permutation cycle created the null candidate DER.

calculatePvalues

Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.

All documentation is copyright its authors; we didn't write any of that.