genomicState: Genomic State for Hsapiens.UCSC.hg19.knownGene

Description Format See Also

Description

Pre-computed genomic state for Hsapiens UCSC hg19 knownGene annotation built using makeGenomicState for TxDb.Hsapiens.UCSC.hg19.knownGene version 2.14.0. The object has been subset for chr21 only.

Format

A GRangesList with two components.

fullGenome

classifies each region as either being exon, intron or intergenic.

codingGenome

classfies the regions as being promoter, exon, intro, 5UTR, 3UTR or intergenic.

See Also

makeGenomicState


derfinder documentation built on May 20, 2017, 10:40 p.m.

Search within the derfinder package
Search all R packages, documentation and source code