chr-methods: Chromosome name for each feature

In genoset: A RangedSummarizedExperiment with methods for copy number analysis

Description

Get chromosome name for each feature. Returns character.

Usage

chr(object)

## S4 method for signature 'GenoSet'
chr(object)

## S4 method for signature 'GenomicRanges'
chr(object)

Arguments

object

GRanges GenoSet

Value

character vector of chromosome positions for each feature

Examples

  data(genoset,package='genoset')
  chr(genoset.ds)  # c('chr1','chr1','chr1','chr1','chr3','chr3','chrX','chrX','chrX','chrX')
  chr(rowRanges(genoset.ds))  # The same

genoset documentation built on Nov. 8, 2020, 6:07 p.m.