numCallable: Count Rle positions >= min
In genoset: A RangedSummarizedExperiment with methods for copy number analysis

For Rle coverage vector, count number of positions where value >= min, think callable bases.

1	numCallable(rle, bounds, min)

`rle`	integer Rle, no NAs
`bounds`	IRanges or matrix, positions in Rle to consider. If `bounds` is a matrix, the first two columns are used as start and end.
`min`	scalar integer, count Rle positions >= this value.

integer vector of length nrow(bounds)

genoset documentation built on Nov. 8, 2020, 6:07 p.m.

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