dot-ks_enrichment: Enrichment test via one-sided Kolmogorov<e2><80><93>Smirnov...

Description Usage Arguments Value

Description

Enrichment test via one-sided Kolmogorov<e2><80><93>Smirnov test

Usage

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.ks_enrichment(
  signature,
  genesets,
  weights = NULL,
  weights.pwr = 1,
  absolute = FALSE,
  plotting = TRUE
)

Arguments

signature

A vector of ranked symbols

genesets

A list of genesets

weights

Weights for weighted score (Subramanian et al.)

weights.pwr

Exponent for weights (Subramanian et al.)

absolute

Takes max-min score rather than the max deviation from null

plotting

Use true to generate plot

Value

A list of data and plots


hypeR documentation built on Nov. 8, 2020, 8:19 p.m.