hyp_show: Convert a hyp object to a reactable table
In hypeR: An R Package For Geneset Enrichment Workflows
Description
Usage
Arguments
Value
Examples
Description
Convert a hyp object to a reactable table
Usage
1
Arguments
hyp_obj
A hyp object
simple
Use true to only include essential columns
Value
A reactable table
Examples
1
2
3
4
5
6
7
8
9
genesets <- msigdb_gsets("Homo sapiens", "C2", "CP:KEGG")
signature <- c("IDH3B","DLST","PCK2","CS","PDHB","PCK1","PDHA1","LOC642502",
"PDHA2","LOC283398","FH","SDHD","OGDH","SDHB","IDH3A","SDHC",
"IDH2","IDH1","OGDHL","PC","SDHA","SUCLG1","SUCLA2","SUCLG2")
hyp_obj <- hypeR(signature, genesets, background=2522)
hyp_show(hyp_obj)
hypeR documentation built on Nov. 8, 2020, 8:19 p.m.
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Description Usage Arguments Value Examples
Description
Convert a hyp object to a reactable table
Usage
1 |
Arguments
hyp_obj |
A hyp object |
simple |
Use true to only include essential columns |
Value
A reactable table
Examples
1 2 3 4 5 6 7 8 9 | genesets <- msigdb_gsets("Homo sapiens", "C2", "CP:KEGG")
signature <- c("IDH3B","DLST","PCK2","CS","PDHB","PCK1","PDHA1","LOC642502",
"PDHA2","LOC283398","FH","SDHD","OGDH","SDHB","IDH3A","SDHC",
"IDH2","IDH1","OGDHL","PC","SDHA","SUCLG1","SUCLA2","SUCLG2")
hyp_obj <- hypeR(signature, genesets, background=2522)
hyp_show(hyp_obj)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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