dot-hiearchy_map: Plot hiearchy map

In hypeR: An R Package For Geneset Enrichment Workflows

Description

Plot hiearchy map

Usage

.hiearchy_map(
  hyp_df,
  rgsets_obj,
  pval_cutoff = 1,
  fdr_cutoff = 1,
  val = c("fdr", "pval"),
  top = NULL,
  title = ""
)

Arguments

hyp_df	A dataframe from a hyp object
rgsets_obj	A relatonal geneset from a hyp object
pval_cutoff	Filter results to be less than pval cutoff
fdr_cutoff	Filter results to be less than fdr cutoff
val	Choose significance value displayed when hovering nodes e.g. c("fdr", "pval")
top	Limit number of pathways shown
title	Plot title

Value

A visNetwork object

hypeR documentation built on Nov. 8, 2020, 8:19 p.m.