hyp_to_rmd: Export hyp object to rmarkdown
In hypeR: An R Package For Geneset Enrichment Workflows

Export hyp object to rmarkdown

hyp_to_rmd(
  hyp_obj,
  file_path,
  title = "Workflow Report",
  subtitle = "",
  author = "",
  header = "Results",
  versioning = TRUE,
  show_dots = TRUE,
  show_emaps = TRUE,
  show_hmaps = FALSE,
  show_tables = TRUE,
  hyp_dots_args = list(top = 15, val = "fdr"),
  hyp_emap_args = list(top = 25, val = "fdr", similarity_metric = "jaccard_similarity",
    similarity_cutoff = 0.2),
  hyp_hmap_args = list(top = 25, val = "fdr"),
  custom_rmd_config = NULL,
  custom_pre_content = NULL,
  custom_post_content = NULL,
  session_info = FALSE
)

`hyp_obj`	A hyp object, multihyp object, or list of multihyp objects
`file_path`	A file path
`title`	Title of markdown report
`subtitle`	Subtitle of markdown report
`author`	Authors of markdown report
`header`	Header name of tabset section
`versioning`	Add versioning information
`show_dots`	Option to show dots plots in tabs
`show_emaps`	Option to show enrichment maps in tabs
`show_hmaps`	Option to show hiearchy maps in tabs
`show_tables`	Option to show table in tabs
`hyp_dots_args`	A list of keyword arguments passed to hyp_dots
`hyp_emap_args`	A list of keyword arguments passed to hyp_emap
`hyp_hmap_args`	A list of keyword arguments passed to hyp_hmap
`custom_rmd_config`	Replace configuration section of markdown report
`custom_pre_content`	Insert custom content before tabset section
`custom_post_content`	Insert custom content after tabset section
`session_info`	Use true to include session info