Description Usage Arguments Examples
Export hyp/multihyp object to excel
1  | hyp_to_excel(hyp_obj, file_path, cols = NULL, versioning = TRUE)
 | 
hyp_obj | 
 A hyp or multihyp object  | 
file_path | 
 A file path  | 
cols | 
 Dataframe columns to include  | 
versioning | 
 Add sheet with versioning information  | 
1 2 3 4 5 6 7 8 9  | genesets <- msigdb_gsets("Homo sapiens", "C2", "CP:KEGG")
signature <- c("IDH3B","DLST","PCK2","CS","PDHB","PCK1","PDHA1","LOC642502",
               "PDHA2","LOC283398","FH","SDHD","OGDH","SDHB","IDH3A","SDHC",
               "IDH2","IDH1","OGDHL","PC","SDHA","SUCLG1","SUCLA2","SUCLG2")
hyp_obj <- hypeR(signature, genesets, background=2522)
hyp_to_excel(hyp_obj, file_path="pathways.xlsx")
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