Files in martini

GWAS Incorporating Networks

README.md

NAMESPACE

DESCRIPTION

LICENSE

build/vignette.rds

src/RcppExports.cpp

src/Makevars

src/evo.cpp

src/run_scones.cpp

data/minisnpMapping.rda

data/minippi.rda

data/minigwas.rda

R/RcppExports.R R/utils.R R/legacy.R R/modules.R R/networks.R R/scones.R R/NAMESPACE_exports.R R/datasets.R R/simulation.R R/ld.R

vignettes/example_causal_subnetworks.png

vignettes/bibliography.bib

vignettes/simulate_phenotype.Rmd vignettes/scones_usage.Rmd man/subnet.Rd man/subvert.Rd man/scones.cv.Rd man/get_ppi.Rd man/minisnpMapping.Rd man/run_scones.Rd man/simulate_causal_snps.Rd man/check_installed.Rd man/scones.Rd man/parse_scones_settings.Rd man/single_snp_association.Rd man/evo.Rd man/calculateG.Rd man/get_evo_settings.Rd man/get_GI_network.Rd man/minippi.Rd man/test_cones_modules.Rd man/ldweight_edges.Rd man/calculateE.Rd man/minigwas.Rd man/get_GM_network.Rd man/search_cones.Rd man/is_coherent.Rd man/get_GS_network.Rd man/get_snp_modules.Rd man/arrange_covars.Rd man/permute_snpMatrix.Rd man/simulate_phenotype.Rd man/score_fold.Rd man/snp2gene.Rd man/encode_gwas.Rd tests/testthat.R tests/testthat/test_run_scones.R tests/testthat/test_subnet.R tests/testthat/test_calculateE.R tests/testthat/big_network.R tests/testthat/minimum_data.R tests/testthat/test_scones.R tests/testthat/test_snp2gene.R tests/testthat/test_single_snp_association.R tests/testthat/test_encode_gwas.R tests/testthat/test_get_GM_network.R tests/testthat/test_simulate_phenotype.R tests/testthat/test_parse_scones_settings.R tests/testthat/test_is_coherent.R tests/testthat/test_scones.cv.R tests/testthat/test_calculateG.R tests/testthat/test_get_evo_settings.R tests/testthat/test_get_GI_network.R tests/testthat/test_check_installed.R tests/testthat/test_ldweight_edges.R tests/testthat/test_simulate_causal_snps.R tests/testthat/test_get_snp_modules.R tests/testthat/test_get_ppi.R tests/testthat/test_evo.R tests/testthat/test_search_cones.R tests/testthat/test_test_cones_modules.R

tests/testthat/examplegwas.rda

tests/testthat/test_get_GS_network.R tests/testthat/test_subvert.R

inst/CITATION

inst/doc/scones_usage.html

inst/doc/simulate_phenotype.Rmd

inst/doc/simulate_phenotype.html

inst/doc/scones_usage.Rmd inst/doc/simulate_phenotype.R inst/doc/scones_usage.R

inst/include/martini_RcppExports.h

inst/include/martini.h

martini documentation built on Nov. 8, 2020, 5:39 p.m.