extractAffyids: Extracting probe ids associated to a specific Gene Ontology...
In oneChannelGUI: A graphical interface designed to facilitate analysis of microarrays and miRNA/RNA-seq data on laptops
Description
Usage
Details
Note
Author(s)
See Also
Description
It is possible to identify the affy ids associated to a specific GO term using the
extractAffyids function.
Usage
1
Details
The function asks to the user to select a file containing probe set ids separated by
carriage return. The file should contain only one column and no header. The user is also
asked to select a specific GO term. The probe sets associated to the specific GO term will
be annotated ans saved in a HTML file.
Note
For the annotation the annotation library associated to the raw data loaded in the
affylmGUI environment is used.
Author(s)
Raffaele A. Calogero
See Also
GOenrichment, plotGO
oneChannelGUI documentation built on Nov. 17, 2017, 11:02 a.m.
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Description Usage Details Note Author(s) See Also
Description
It is possible to identify the affy ids associated to a specific GO term using the extractAffyids function.
Usage
1 |
Details
The function asks to the user to select a file containing probe set ids separated by carriage return. The file should contain only one column and no header. The user is also asked to select a specific GO term. The probe sets associated to the specific GO term will be annotated ans saved in a HTML file.
Note
For the annotation the annotation library associated to the raw data loaded in the affylmGUI environment is used.
Author(s)
Raffaele A. Calogero
See Also
GOenrichment, plotGO
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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