extractAffyids: Extracting probe ids associated to a specific Gene Ontology...

Description Usage Details Note Author(s) See Also


It is possible to identify the affy ids associated to a specific GO term using the extractAffyids function.




The function asks to the user to select a file containing probe set ids separated by carriage return. The file should contain only one column and no header. The user is also asked to select a specific GO term. The probe sets associated to the specific GO term will be annotated ans saved in a HTML file.


For the annotation the annotation library associated to the raw data loaded in the affylmGUI environment is used.


Raffaele A. Calogero

See Also

GOenrichment, plotGO

oneChannelGUI documentation built on Nov. 17, 2017, 11:02 a.m.