qc.ok: Has simpleaffy's QC environment been set up?

In simpleaffy: Very simple high level analysis of Affymetrix data

Description

Simpleaffy requires a definition file describing the qc probes, spikes, alpha values, etc. for the array of interest. This is used to initialize the QC environment for the array (usually implicitly within the qc function), by a call to setQCEnvironment. This function can be used to check if the qc environment has been set up for the current session

Usage

  qc.ok()

Value

True or False

Author(s)

Crispin J Miller

References

http://bioinformatics.picr.man.ac.uk/

See Also

setQCEnvironment qc qc.have.params cdfName

Examples

  qc.ok()
  setQCEnvironment("hgu133plus2cdf")
  qc.ok()

simpleaffy documentation built on Nov. 8, 2020, 11:09 p.m.