simpleaffy: Very simple high level analysis of Affymetrix data

Provides high level functions for reading Affy .CEL files, phenotypic data, and then computing simple things with it, such as t-tests, fold changes and the like. Makes heavy use of the affy library. Also has some basic scatter plot functions and mechanisms for generating high resolution journal figures...

Package details

AuthorCrispin J Miller
Bioconductor views Annotation DataImport DifferentialExpression Microarray OneChannel Preprocessing QualityControl ReportWriting Transcription Visualization
MaintainerCrispin Miller <>
LicenseGPL (>= 2)
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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simpleaffy documentation built on Nov. 8, 2020, 11:09 p.m.