Files in simpleaffy
Very simple high level analysis of Affymetrix data

README
DESCRIPTION
NAMESPACE
inst/doc/simpleAffy.pdf inst/doc/simpleAffy.R
inst/doc/simpleAffy.Rnw
inst/extdata/atgenomecdf.qcdef
inst/extdata/rhesuscdf.qcdef
inst/extdata/mu11ksubbcdf.qcdef
inst/extdata/rgu34ccdf.qcdef
inst/extdata/moe430acdf.qcdef
inst/extdata/zebrafishcdf.qcdef
inst/extdata/ygs98cdf.qcdef
inst/extdata/mgu74bv2cdf.qcdef
inst/extdata/poplarcdf.qcdef
inst/extdata/vitisviniferacdf.qcdef
inst/extdata/hgu95bcdf.qcdef
inst/extdata/hgu133plus2cdf.qcdef
inst/extdata/porcinecdf.qcdef
inst/extdata/mouse4302cdf.qcdef
inst/extdata/mouse430b2cdf.qcdef
inst/extdata/hgu95ccdf.qcdef
inst/extdata/rae230acdf.qcdef
inst/extdata/hgu95av2cdf.qcdef
inst/extdata/yeast2cdf.qcdef
inst/extdata/hgu133acdf.qcdef
inst/extdata/drosgenome1cdf.qcdef
inst/extdata/hgfocuscdf.qcdef
inst/extdata/mgu74bcdf.qcdef
inst/extdata/hgu133bcdf.qcdef
inst/extdata/hgu95ecdf.qcdef
inst/extdata/soybeancdf.qcdef
inst/extdata/celeganscdf.qcdef
inst/extdata/mgu74acdf.qcdef
inst/extdata/rgu34acdf.qcdef
inst/extdata/mouse430a2cdf.qcdef
inst/extdata/hcg110cdf.qcdef
inst/extdata/hgu95acdf.qcdef
inst/extdata/mu11ksubacdf.qcdef
inst/extdata/ath1121501cdf.qcdef
inst/extdata/hgu95dcdf.qcdef
inst/extdata/mgu74ccdf.qcdef
inst/extdata/hgu133atagcdf.qcdef
inst/extdata/hgu133a2cdf.qcdef
inst/extdata/mgu74cv2cdf.qcdef
inst/extdata/mgu74av2cdf.qcdef
inst/extdata/rae230bcdf.qcdef
inst/extdata/rgu34bcdf.qcdef
inst/extdata/rat2302cdf.qcdef
vignettes/QCandSimpleaffy.pdf
vignettes/simpleAffy.Rnw
R/get.annotation.R R/heatmap.R R/qc.stats.R R/pairwise.comparison.R R/justMAS.R R/read.affy.R R/detection.p.val.R R/call.exprs.R R/trad.scatter.plot.R
src/simpleaffy.c
man/get.array.subset.affy.Rd man/qc.get.probes.Rd man/PairComp-class.Rd man/standard.pearson.Rd man/qc.read.file.Rd man/qc.Rd man/plot.qc.stats.Rd man/qc.get.ratios.Rd man/qc.stats.Rd man/get.array.subset.Rd man/hmap.colors.Rd man/read.affy.Rd man/journalpng.Rd man/qc.get.spikes.Rd man/hmap.eset.Rd man/trad.scatter.plot.Rd man/qc.get.array.Rd man/qc.get.alpha1.Rd man/all.present.Rd man/pairwise.comparison.Rd man/get.array.indices.Rd man/setQCEnvironment.Rd man/plot.pairwise.comparison.Rd man/qc.affy.Rd man/detection.p.val.Rd man/qc.ok.Rd man/hmap.pc.Rd man/all.present.in.group.Rd man/simpleaffy-deprecated.Rd man/justMAS.Rd man/QCStats-class.Rd man/pairwise.filter.Rd man/call.exprs.Rd man/get.fold.change.and.t.test.Rd man/read.affy.mixed.Rd man/qc.have.params.Rd man/bg.correct.sa.Rd man/get.annotation.Rd
build/vignette.rds
data/qcs.rda
simpleaffy documentation built on Nov. 1, 2018, 5:02 a.m.