convertSeuratToSCE: convertSeuratToSCE Converts the input seurat object to a sce...
In singleCellTK: Comprehensive and Interactive Analysis of Single Cell RNA-Seq Data
Description
Usage
Arguments
Value
Examples
View source: R/seuratFunctions.R
Description
convertSeuratToSCE
Converts the input seurat object to a sce object
Usage
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convertSeuratToSCE(
seuratObject,
normAssayName = "seuratNormData",
scaledAssayName = "seuratScaledData"
)
Arguments
seuratObject
Input Seurat object
normAssayName
Name of assay to store the normalized data. Default "seuratNormData".
scaledAssayName
Name of assay to store the scaled data. Default "seuratScaledData".
Value
SingleCellExperiment output object
Examples
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data(scExample, package = "singleCellTK")
seurat <- convertSCEToSeurat(sce)
sce <- convertSeuratToSCE(seurat)
singleCellTK documentation built on Nov. 8, 2020, 5:21 p.m.
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Description Usage Arguments Value Examples
View source: R/seuratFunctions.R
Description
convertSeuratToSCE Converts the input seurat object to a sce object
Usage
1 2 3 4 5 | convertSeuratToSCE(
seuratObject,
normAssayName = "seuratNormData",
scaledAssayName = "seuratScaledData"
)
|
Arguments
seuratObject |
Input Seurat object |
normAssayName |
Name of assay to store the normalized data. Default |
scaledAssayName |
Name of assay to store the scaled data. Default |
Value
SingleCellExperiment output object
Examples
1 2 3 | data(scExample, package = "singleCellTK")
seurat <- convertSCEToSeurat(sce)
sce <- convertSeuratToSCE(seurat)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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