API for snapCGH
Segmentation, normalisation and processing of aCGH data

Global functions
IDProbes	Man page
LargeDataObject-class	Man page
MergeLevels.new	Man page Source code
MergeLevels.old	Man page
SegList-class	Man page
Viterbi.five	Man page
Viterbi.four	Man page
Viterbi.three	Man page
Viterbi.two	Man page
[.SegList	Man page
cbind.SegList	Man page Source code
chrominfo.Mb	Man page
combine.func	Man page
compareBreakPoints	Man page Source code
compareSegmentations	Man page Source code
convert.output	Man page
dim	Man page
dim,SegList-method	Man page
dim.MAList	Man page
dim.RGList	Man page
dim.SegList	Man page Source code
dimnames	Man page
dimnames,SegList-method	Man page
dimnames.SegList	Man page Source code
filterClones	Man page Source code
find.param.five	Man page
find.param.four	Man page
find.param.one	Man page
find.param.three	Man page
find.param.two	Man page
findBreakPoints	Man page
fit.model	Man page
floor.func	Man page
generate.data	Man page
genomePlot	Man page
heatmapGenome	Man page
imputeMissingValues	Man page
length	Man page
length,SegList-method	Man page
length.MAList	Man page
length.RGList	Man page
length.SegList	Man page Source code
log2ratios	Man page Source code
maPalette	Man page
mergeStates	Man page
plotChrom	Man page
plotSegmentedGenome	Man page
plotValChrom	Man page
plotValGenome	Man page
plotvalChrom.func	Man page
print.SegList	Man page
processCGH	Man page
prop.na	Man page
rbind.SegList	Man page Source code
read.clonesinfo	Man page
readPositionalInfo	Man page
removeByWeights	Man page Source code
run.nelder	Man page Source code
runBioHMM	Man page
runDNAcopy	Man page Source code
runGLAD	Man page Source code
runHomHMM	Man page
runTilingArray	Man page Source code
sample.names	Man page
show,LargeDataObject-method	Man page
show,SegList-method	Man page
simulateData	Man page
states.hmm.func	Man page
zoomChromosome	Man page Source code
zoomGenome	Man page Source code